Table of Contents

R plots
- Box plots
  - One batch with replicates
  - Multiple batches with replicates

R plots

Box plots

An user guide to walk through data visualization by box plot in R.
Please download the tutorial and open with browser (like Chrome) for more detail.

R Markdown Document for Boxplots

One batch with replicates

Sample input

sample1.xlsx

R script

Please download the R script using the link below.
single-batch_boxplot.R

Sample output

Plots can be exported as PDF or PNG files. Here shows the PNG files.

Version 1: Displays all data points using a single, uniform color.
- PNG: setting width 600 and height 400.
- PDF: width 6 inch and height 4 inch. simple_boxplot1_w6h4.pdf
Version 2: Colors data points by Strain and adds statistical significance group labels at the top.
- PNG: setting width 600 and height 400.
- PDF: width 6 inch and height 4 inch. simple_boxplot2_w6h4.pdf

Multiple batches with replicates

Sample input

sample2.xlsx

R script

Please download the R script using the link below.
mutiple-batches_boxplot.R

Sample output

Plots can be exported as PDF or PNG files. Here shows the PNG files.

Version 1: Displays data with batches shown in distinct colors.
- PNG: setting width 600 and height 400.
- PDF: width 6 inch and height 4 inch. mult_boxplot1_w6h4.pdf
Version 2: Displays batches in distinct colors and adds statistical significance group labels at the top.
- PNG: setting width 600 and height 400.
- PDF: width 6 inch and height 4 inch. mult_boxplot2_w6h4.pdf