computers:bioinfo_server_configuration
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computers:bioinfo_server_configuration [2023/05/19 17:25] – [PAML] chkuo | computers:bioinfo_server_configuration [2024/04/19 15:47] (current) – [MrBayes] chkuo | ||
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chkuo@koa[/ | chkuo@koa[/ | ||
# install mrbayes | # install mrbayes | ||
- | chkuo@koa[/ | + | # 2024/ |
- | chkuo@koa[/ | + | # 3.2.6 -> 3.2.7 |
- | chkuo@koa[/ | + | chkuo@koa[/ |
- | chkuo@koa[/ | + | chkuo@koa[/ |
- | chkuo@koa[/ | + | chkuo@koa[/ |
- | chkuo@koa[/ | + | chkuo@koa[/ |
- | chkuo@koa[/ | + | chkuo@koa[/ |
- | chkuo@koa[/ | + | chkuo@koa[/ |
+ | chkuo@koa[/ | ||
+ | chkuo@koa[/ | ||
+ | Version: | ||
</ | </ | ||
Line 956: | Line 959: | ||
<code bash> | <code bash> | ||
- | # updated | + | # 2023/09/07; v0.4.9b -> v0.5.0; chkuo |
+ | # 2020/04/29; v0.4.8b -> v0.4.9b; chkuo | ||
chkuo@koa[/ | chkuo@koa[/ | ||
- | chkuo@koa[/ | + | chkuo@koa[/ |
- | chkuo@koa[/ | + | chkuo@koa[/ |
- | chkuo@koa[/ | + | chkuo@koa[/ |
- | chkuo@koa[/ | + | chkuo@koa[/ |
- | Unicycler v0.4.9b | + | Unicycler v0.5.0 |
</ | </ | ||
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===== SignalP ===== | ===== SignalP ===== | ||
* Predicts the presence and location of signal peptide cleavage sites in amino acid sequences. | * Predicts the presence and location of signal peptide cleavage sites in amino acid sequences. | ||
- | * Server: | + | * [[https://services.healthtech.dtu.dk/ |
- | * Download: [[http:// | + | |
+ | |||
+ | |||
+ | <code bash> | ||
+ | # 2024/02/07 | ||
+ | # fast | ||
+ | chkuo@koa[/ | ||
+ | chkuo@koa[/ | ||
+ | chkuo@koa[/ | ||
+ | # slow | ||
+ | chkuo@koa[/ | ||
+ | chkuo@koa[/ | ||
+ | chkuo@koa[/ | ||
+ | |||
+ | chkuo@koa[/ | ||
+ | / | ||
+ | chkuo@koa[/ | ||
+ | SignalP 6.0 Signal peptide prediction tool 6.0h | ||
+ | </ | ||
<code bash> | <code bash> | ||
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<code bash> | <code bash> | ||
- | chkuo@koa[/ | + | # 2024/ |
- | chkuo@koa[/ | + | # note: v1.34 has some error message; use v1.33 for now |
- | Archive: | + | chkuo@koa[/ |
- | inflating: fastANI | + | chkuo@koa[/ |
- | | + | Archive: |
- | inflating: __MACOSX/ | + | inflating: fastANI |
- | chkuo@koa[/ | + | chkuo@koa[/ |
</ | </ | ||
computers/bioinfo_server_configuration.1684488308.txt.gz · Last modified: 2023/05/19 17:25 by chkuo