tutorials:perl_examples
Differences
This shows you the differences between two versions of the page.
| Both sides previous revisionPrevious revisionNext revision | Previous revision | ||
| tutorials:perl_examples [2011/01/20 15:20] – chkuo | tutorials:perl_examples [2017/04/12 17:27] (current) – chkuo | ||
|---|---|---|---|
| Line 1: | Line 1: | ||
| - | ====== Perl Examples | + | ====== Perl examples |
| * Find empty files in a directory: [[tutorials: | * Find empty files in a directory: [[tutorials: | ||
| - | * Unwrap sequences in fasta files: [[tutorials: | + | * Rename |
| - | * Find homopolymeric regions: [[tutorials: | + | |
| * Generate command scripts to run blast+: [[tutorials: | * Generate command scripts to run blast+: [[tutorials: | ||
| * Execute command scripts: [[tutorials: | * Execute command scripts: [[tutorials: | ||
| - | * Trim sequence based on lucy: [[tutorials: | + | * Parse blast+ results, 1 hit per line: [[tutorials: |
| + | * Parse blast+ results, 1 HSP per line: [[tutorials: | ||
| + | |||
| + | * Unwrap sequences in fasta files: [[tutorials: | ||
| + | * Find homopolymeric regions: [[tutorials: | ||
| * Correct sequence orientation in a fasta file: [[tutorials: | * Correct sequence orientation in a fasta file: [[tutorials: | ||
| + | * Trim sequence based on lucy: [[tutorials: | ||
| * Trim sequence based on regex: [[tutorials: | * Trim sequence based on regex: [[tutorials: | ||
| - | * Rename files based on regex: [[tutorials: | ||
tutorials/perl_examples.1295508004.txt.gz · Last modified: by chkuo